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pcdna3 1 vector  (Addgene inc)


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    Structured Review

    Addgene inc pcdna3 1 vector
    Pcdna3 1 Vector, supplied by Addgene inc, used in various techniques. Bioz Stars score: 95/100, based on 115 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/flag+ha+pcdna3+1+vector/FLAG-HA-pcDNA3%2E1-+(Plasmid+%2352535)/10__1158_slash_0008___5472__can___25___2893-62-10-12
    Average 95 stars, based on 115 article reviews
    pcdna3 1 vector - by Bioz Stars, 2026-09
    95/100 stars

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    Related Articles

    Amplification:

    Article Title: Impaired GATE16-mediated exocytosis in exocrine tissues causes Sjögren’s syndrome-like exocrinopathy
    Article Snippet: Plasmid construction The cDNA of the coding region of the Vamp2 ( NM_009497 ), Vamp8 ( NM_016794 ), Snap23 (NM_00117792), and Gate16 ( NM_026693 ) genes was amplified from the SMGs of male C57BL/6J mice, using the ExpandTM High Fidelity PCR System (Roche), and then subcloned into a pMD20 vector (Takara Bio, Shiga, Japan) and named pMD20-Vamp2 , pMD20-Vamp8 , pMD20-Snap23 , and pMD20-Gate16 , respectively. .. For Vamp2 , Vamp8 , or Snap23 , the fragments amplified with specific forward and common reverse primers with Phusion® High-Fidelity DNA Polymerase (New England Biolabs) were digested by EcoRI and EcoRV (New England Biolabs) and then cloned into the FLAG-HA-pcDNA3.1 vector (addgene #52,535); these constructs were named pcDNA-FLAG-HA-Vamp2 , pcDNA-FLAG-HA-Vamp8 , and pcDNA-FLAG-HA-Snap23 , respectively. .. The V5-epitope tag fragment was cloned into a pCAG-GFP vector at the SmaI site (addgene #11,150), which was named pCAG-V5-GFP .

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Clone Assay:

    Article Title: Impaired GATE16-mediated exocytosis in exocrine tissues causes Sjögren’s syndrome-like exocrinopathy
    Article Snippet: Plasmid construction The cDNA of the coding region of the Vamp2 ( NM_009497 ), Vamp8 ( NM_016794 ), Snap23 (NM_00117792), and Gate16 ( NM_026693 ) genes was amplified from the SMGs of male C57BL/6J mice, using the ExpandTM High Fidelity PCR System (Roche), and then subcloned into a pMD20 vector (Takara Bio, Shiga, Japan) and named pMD20-Vamp2 , pMD20-Vamp8 , pMD20-Snap23 , and pMD20-Gate16 , respectively. .. For Vamp2 , Vamp8 , or Snap23 , the fragments amplified with specific forward and common reverse primers with Phusion® High-Fidelity DNA Polymerase (New England Biolabs) were digested by EcoRI and EcoRV (New England Biolabs) and then cloned into the FLAG-HA-pcDNA3.1 vector (addgene #52,535); these constructs were named pcDNA-FLAG-HA-Vamp2 , pcDNA-FLAG-HA-Vamp8 , and pcDNA-FLAG-HA-Snap23 , respectively. .. The V5-epitope tag fragment was cloned into a pCAG-GFP vector at the SmaI site (addgene #11,150), which was named pCAG-V5-GFP .

    Article Title: An integrated genetic analysis of epileptogenic brain malformed lesions.
    Article Snippet: .. FLAG-HA-pcDNA3.1 vector and pcDNA3-Flag-mTORwt vector were purchased from Addgene (plasmid # 52535 and # 26603) [15, 35], and Halo-tagged cDNA clones of MAP2K1, PTPN11, and GAB1 were obtained from Promega (Madison, WI, USA). .. Site-directed mutagenesis was performed using the Prime STAR GXL polymerase (TaKaRa Bio) to introduce the variants c.4339_4353del or c.4379T > C (as a positive control) in MTOR, c.173_187del in MAP2K1, or c.178G > C in PTPN11 into each plasmid; each created mutant clone was confirmed using Sanger sequencing.

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Article Title: An integrated genetic analysis of epileptogenic brain malformed lesions
    Article Snippet: .. FLAG-HA-pcDNA3.1 vector and pcDNA3-Flag-mTOR-wt vector were purchased from Addgene (plasmid # 52535 and # 26603) [ , ], and Halo-tagged cDNA clones of MAP2K1 , PTPN11 , and GAB1 were obtained from Promega (Madison, WI, USA). .. Site-directed mutagenesis was performed using the Prime STAR GXL polymerase (TaKaRa Bio) to introduce the variants c.4339_4353del or c.4379T > C (as a positive control) in MTOR , c.173_187del in MAP2K1 , or c.178G > C in PTPN11 into each plasmid; each created mutant clone was confirmed using Sanger sequencing.

    Construct:

    Article Title: Impaired GATE16-mediated exocytosis in exocrine tissues causes Sjögren’s syndrome-like exocrinopathy
    Article Snippet: Plasmid construction The cDNA of the coding region of the Vamp2 ( NM_009497 ), Vamp8 ( NM_016794 ), Snap23 (NM_00117792), and Gate16 ( NM_026693 ) genes was amplified from the SMGs of male C57BL/6J mice, using the ExpandTM High Fidelity PCR System (Roche), and then subcloned into a pMD20 vector (Takara Bio, Shiga, Japan) and named pMD20-Vamp2 , pMD20-Vamp8 , pMD20-Snap23 , and pMD20-Gate16 , respectively. .. For Vamp2 , Vamp8 , or Snap23 , the fragments amplified with specific forward and common reverse primers with Phusion® High-Fidelity DNA Polymerase (New England Biolabs) were digested by EcoRI and EcoRV (New England Biolabs) and then cloned into the FLAG-HA-pcDNA3.1 vector (addgene #52,535); these constructs were named pcDNA-FLAG-HA-Vamp2 , pcDNA-FLAG-HA-Vamp8 , and pcDNA-FLAG-HA-Snap23 , respectively. .. The V5-epitope tag fragment was cloned into a pCAG-GFP vector at the SmaI site (addgene #11,150), which was named pCAG-V5-GFP .

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Article Title: Discovery and Mechanism of 16-19F, a Novel Synthetic Lethal Inhibitor of the PRMT5•MTA Complex in MTAP-Deleted Cancer Cells.
    Article Snippet: Protein arginine methyltransferase 5 (PRMT5), which uniquely binds to 5′-methylthioadenosine (MTA) among the PRMT family, is emerging as an attractive epigenetic target for 5′-methylthioadenosine phosphorylase (MTAP)-deleted cancer treatments.. Here, we report the discovery of a novel inhibitor 16−19F, which is a potent binder to the PRMT5•MTA, PRMT5•SAH, and PRMT5•SAM complexes and selectively inhibited MTAP-deleted cancer cell growth.. Based on transcriptome analysis, we found that kinetochore metaphase signaling and cell cycle control of the chromosomal replication pathway were downregulated after 16−19F treatment in the MDA-MB-231 TNBC cell line.

    Plasmid Preparation:

    Article Title: EGR Proteins Mediate Interferon‐Independent Anti‐HSV‐1 Responses Through Viral and Host Targets
    Article Snippet: .. The human Egr1 gene was inserted between the EcoRI and HindIII sites of FLAG‐HA‐pcDNA3.1‐ vector (Addgene, 52535, here referred to as pcDNA) to make pEGR1. ..

    Article Title: An integrated genetic analysis of epileptogenic brain malformed lesions.
    Article Snippet: .. FLAG-HA-pcDNA3.1 vector and pcDNA3-Flag-mTORwt vector were purchased from Addgene (plasmid # 52535 and # 26603) [15, 35], and Halo-tagged cDNA clones of MAP2K1, PTPN11, and GAB1 were obtained from Promega (Madison, WI, USA). .. Site-directed mutagenesis was performed using the Prime STAR GXL polymerase (TaKaRa Bio) to introduce the variants c.4339_4353del or c.4379T > C (as a positive control) in MTOR, c.173_187del in MAP2K1, or c.178G > C in PTPN11 into each plasmid; each created mutant clone was confirmed using Sanger sequencing.

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Article Title: An integrated genetic analysis of epileptogenic brain malformed lesions
    Article Snippet: .. FLAG-HA-pcDNA3.1 vector and pcDNA3-Flag-mTOR-wt vector were purchased from Addgene (plasmid # 52535 and # 26603) [ , ], and Halo-tagged cDNA clones of MAP2K1 , PTPN11 , and GAB1 were obtained from Promega (Madison, WI, USA). .. Site-directed mutagenesis was performed using the Prime STAR GXL polymerase (TaKaRa Bio) to introduce the variants c.4339_4353del or c.4379T > C (as a positive control) in MTOR , c.173_187del in MAP2K1 , or c.178G > C in PTPN11 into each plasmid; each created mutant clone was confirmed using Sanger sequencing.

    Article Title: Impaired GATE16-mediated exocytosis in exocrine tissues causes Sjögren’s syndrome-like exocrinopathy
    Article Snippet: The cDNA of the coding region of the Vamp2 ( NM_009497 ), Vamp8 ( NM_016794 ), Snap23 (NM_00117792), and Gate16 ( NM_026693 ) genes was amplified from the SMGs of male C57BL/6J mice, using the ExpandTM High Fidelity PCR System (Roche), and then subcloned into a pMD20 vector (Takara Bio, Shiga, Japan) and named pMD20-Vamp2 , pMD20-Vamp8 , pMD20-Snap23 , and pMD20-Gate16 , respectively. .. For Vamp2 , Vamp8 , or Snap23 , the fragments amplified with specific forward and common reverse primers with Phusion® High-Fidelity DNA Polymerase (New England Biolabs) were digested by EcoRI and EcoRV (New England Biolabs) and then cloned into the FLAG-HA-pcDNA3.1 vector (addgene #52,535); these constructs were named pcDNA-FLAG-HA-Vamp2 , pcDNA-FLAG-HA-Vamp8 , and pcDNA-FLAG-HA-Snap23 , respectively. .. The V5-epitope tag fragment was cloned into a pCAG-GFP vector at the SmaI site (addgene #11,150), which was named pCAG-V5-GFP .

    Expressing:

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Retroviral:

    Article Title: FAM72A antagonizes UNG2 to promote mutagenic repair during antibody maturation
    Article Snippet: .. Mouse Ung2 was amplified from Ung2 cDNA (OriGene) and cloned into Flag-HA-pcDNA3.1 vector (Addgene, plasmid #52535) using Gibson assembly kit (New England Biolabs) to create pcDNA3.1-Ung2-polyGly-Flag (Ung2-Flag) expression construct or the pMX-PIE retroviral vector. ..

    Cloning:

    Article Title: Discovery and Mechanism of 16-19F, a Novel Synthetic Lethal Inhibitor of the PRMT5•MTA Complex in MTAP-Deleted Cancer Cells.
    Article Snippet: Protein arginine methyltransferase 5 (PRMT5), which uniquely binds to 5′-methylthioadenosine (MTA) among the PRMT family, is emerging as an attractive epigenetic target for 5′-methylthioadenosine phosphorylase (MTAP)-deleted cancer treatments.. Here, we report the discovery of a novel inhibitor 16−19F, which is a potent binder to the PRMT5•MTA, PRMT5•SAH, and PRMT5•SAM complexes and selectively inhibited MTAP-deleted cancer cell growth.. Based on transcriptome analysis, we found that kinetochore metaphase signaling and cell cycle control of the chromosomal replication pathway were downregulated after 16−19F treatment in the MDA-MB-231 TNBC cell line.



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